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- đ Happy Ramadan, Lent, and Lunar New Year
This year feels special. A good proportion of people from different faith traditions are fasting around the same time, which happens once in 33 years! There is something beautiful about that shared discipline. Ramadan, for me, is more than decorations, iftar gatherings, self-discovery, and celebrating identity. It is also a time to quiet something else â what many now call âfood noise.â What Is Food Noise? Recently, I had a thoughtful conversation with my healthcare provider. She gently asked questions about my relationship with food and how I respond to impulses in my body. After reflecting, I realized something uncomfortable but true: Food occupies a loud space in my mind. Hereâs what food noise can sound like: Youâre at a dinner party. Chocolate cake with strawberries is served. Your brain begins: âThat looks amazing⊠but Iâm out of calories. Wait â strawberries are healthy. Maybe just the strawberries. But what about the glaze? Is that dark chocolate? Dark chocolate is healthy⊠Maybe I can take it home and portion itâŠWho am I kidding? Iâll eat it all.â Endless negotiation. Math. Strategy. Justification. If this sounds familiar, you know what food noise is . What I Learned from Reading Around the same time, I bought five bestselling books about obesity. Iâve finished 3.5 so far. What struck me most is this: For many people, food does not create this internal negotiation. Hunger and fullness cues are relatively quiet and self-regulated. That difference is not about morality or willpower. It is biology. We know this now, because patients report that after they start taking the new obesity medications, this whole speech bubble goes "pufff" . It is gone. They can focus on goals, activities, learn an instrument, plan a hike and so on, without constantly battling with their own brains. Once the loop of food noise is turned on, until it is controlled (mentally) or gone (with medications), no matter how much willpower we have, the cycle of gaining and losing weight just repeats. đ The Obesity Code  â Dr. Jason Fung This book reviews historical diet experiments and proposes a hormonal model of obesity â emphasizing insulinâs role. The central argument: Chronic high insulin levels may contribute to insulin resistance and weight gain. The tone can feel sobering â many diets âworkâ short-term and then fail long-term. His proposed solution centers on: Reducing refined carbohydrates Avoiding constant snacking Intermittent fasting đ How to Lose Weight for the Last Time  â Dr. Katrina Ubell This book is different in tone â deeply psychological. If I were to frame any sentence in the book it would be: "I stopped eating for emotional reasons." Dr. Ubell focuses on: Recognizing food noise Observing urges without reacting Building metacognitive awareness Choosing small sustainable habits I chose: Journaling food and weight Eliminating sugar and flour Plan your next day the night before The journaling has been eye-opening. đ Enough  (GLP-1 Perspective) by Dr. Ania Jastreboff This book discusses modern GLP-1 receptor medications and includes powerful anecdotes â including stories from Oprah. One that struck me: Intense exercise + severe calorie restriction did not produce weight loss. This reinforces a critical point: Obesity is a chronic metabolic condition â not a character flaw. Genetics, Evolution, and Environment We often blame genetics. But the rapid rise in obesity since the 1970s suggests environmental and hormonal factors play major roles. There is research showing: Maternal metabolic state during pregnancy influences offspring risk. Early hormonal exposure may affect long-term regulation. This is complex, multifactorial science â not simple inheritance. One Common Theme Across All Books Stop constant snacking. Three meals + three snacks keeps insulin elevated most of the day. Reducing eating frequency may allow hormonal cycles to normalize. That was another eye-opener for me. A Ramadan Reflection Fasting interrupts food noise; maybe by creating separated insulin peaks. It creates space between impulse and action. Certain foods, like sugar, flour, starchy vegetables like potatoes, processed foods, can create special urges in the brain. If not controlled leads to over eating by numbing the centers that control hunger and satiety. One prevention is to recognize such food and just quit them. Another is to control the response in the brain, which is harder: When an urge rises, you let it pass. The wave comes.The wave goes. You remain. If these two sound like they may not work another suggestion is spiritual control. The book Sugar Fast for 40 days gives strategies from the spiritual Christian perspective. Whether your framework is scientific or spiritual â both paths acknowledge the same truth: Awareness changes behavior. A Final Thought In 2026, we are not helpless. We have: Behavioral tools Psychological insight Hormonal understanding Medications that work for many people Obesity, like diabetes or hypertension, often requires long-term management. Perhaps one day, we will understand prevention even better. Until then, if you notice food noise, pause. Name it. Let the wave pass. đ Ramadan Mubarak.đ Peace to those observing Lent.đ§§ Joy to those celebrating the Lunar New Year.
- Hola Amigos
Hola, indeed, after a long time! I intended to write about my experience in Cancun, Mexicoâhoping to paint a picture for curious minds and to amplify my internal gratitude. But before the beaches and crazy bus drivers, letâs reflect on my first semester teaching at VCU. I should probably admit that I had a lot of head scratching the first two weeks. The type of scratching that peels off the crust of a pimple that just healed. My anxiety and scratching gradually settled down to a manageable routine. Without the gracious and deep support from my fellow bioinformatics professors in SLSS, I would not have figured out a way to float this soon. Teaching bioinformatics is inherently different from the âsame oldâ molecular and cellular biology lectures that I was used to giving. Being a visual learner myself, just looking at text and talking over text for long was different. I could not resist adding pictures to my Jupyter notebooks. Next challenge was: how can I still sing and make games about blocks of code? Well, we managed! As we kicked off the semester, I sang with the Take Down melody: âYou are gonna be the master of Python coding⊠How can you sleep or live with yourself without knowing a line of Python coding?â Later, explaining how infinite loops work, we sang âI am unstoppable, I am Porsche with no breaks.â This gave me a chance to explain the break keyword in Python. Then, when we talked about try-except blocks, we sang âWe canât fix it if we never face it.â You could probably notice how I became a fan of Huntrix in the meantime. Teaching Bioethics was a whole new thing. We discussed several bioethics concepts: truth-telling, autonomy, confidentiality, beneficence, who gets to make a decision, who is impacted, how many layers of complications exist here, and how we even tease them apart. Ethics of stem cells, embryos, and embryo manipulation with the advances in gene editing have been dense topics. To empathize with a couple going through similar debates, we had a role play describing the decision-making process for donating frozen embryos for research. We were fortunate to have a field trip to University of Richmond. Dr. Jessica Flanigan was our kind host and gave us a speed lecture with active learning. The students had to move to the side of the room when they agreed or disagreed with an idea. Inside the classrooms, the group discussions and deep, thoughtful communications were the backbone of the course. Now that the semester is almost over, I am excited to plan for 301 and 420 courses coming up next. But for now, back to Cancun. We only stayed for 5 days at the Royal Cancun. What I liked most about Cancun was that it was very similar to Antalya, my hometown. The beach view is stunning, and there are so many opportunities to have fun on the sand, in a pool, on a canoe, or on a Captain Hookâstyled party ship. The way you spend your time will depend on your intention. There are many luxury shopping malls and stores as well as a flea market where you would need to negotiate hard. The all-inclusive nature of the hotel is very humbling. I almost always wanted to pay for the dinner, but they kept saying, âAll included.â Mexicans are very much like Turkish people: forgiving, generous, hospitable, and in a rush in traffic. We took the city buses to see around, and I kept telling my kids, this is the same as riding a bus in Turkiye. The roads are narrower, the buses are faster, and they even drive with the door open while a lady who just got on tries to get coins out of her purse while holding onto nothing. Mexicans are also very much into music and dances. The show at the Xcaret park rightfully demonstrated Mexican history and how they embraced Christianity while preserving the Mayan culture. I guess I am trying to put together in my head two very different experiences. If you decide to go to Cancun for a vacation, or jump into the unknown waters of the coding world, you are not alone! Each new thing is scary at first, and all initiatives are unsettling. Be courageous to take the first step, soon you will notice that the second step is actually not as difficult as the first one. Letâs wait and see what the next semester will bring. Until then, adios amigos!
- đ± New Soil, Same Courageous Sprout đ±
I wanted to share a bit of exciting newsâthis fall, Iâll be joining Virginia Commonwealth University as an Assistant Professor of Bioinformatics. đ Iâll be mostly teaching bioinformatics and continuing my research and collaboration efforts đ My curiosity for bioinformatics first bloomed during my postdoc, when I found myself deep in single-cell RNA-seq. I remember puzzling over UMAP: how could something be ânot wrong,â and also ânot correctâ? That question pulled me into the math, the statistics, the structure beneath the surface. Iâm still learningâand that, to me, is the best part of this journey . I hope this new chapter will help me keep growingâand maybe even spill over enough to water other sprouts nearby. We will be super courageous and tough learners! đȘ Iâm incredibly grateful for the warm welcome from Dr. Rima Franklin, and to the search committee: Dr. Allison Johnson, Dr. Andrew Sackman, and Dr. LaMont Cannonâthank you for this opportunity. To all my mentorsâthank you for lighting the path. To my students and my familyâthank you for making it all meaningful. Here we go. đżđ»đ»đ» hashtag#newbeginnings  hashtag#bioinformatics  hashtag#academia  hashtag#grateful  hashtag#alwayslearning
- London Reflections (and a Flock of Hope)
Today is my second (or maybe third?) day with a sore throat and strep infection. Iâm having a hard time swallowing and speaking. I had meant to study and make progress on my collaborative projects or courseworkâbut then I remembered I still needed to write my London reflections. Before we get to London, though, I should share something closer to home: we now have a flock of parakeets . A total of five babies have hatched, and there are more eggs being kept warm under their mama. Their names so far are Pamuk  (Cotton), Ćeker  (Candy), Bulut  (Cloud), Umut  (Hope), andâhmmâI seem to be blanking on the fifth name. Watching parakeet eggs hatch and seeing how those fragile, unformed bodies turn into delicate, pretty birds has been unexpectedly moving. Human babies are also most vulnerable as newbornsâyet somehow, also the cutest. Thereâs something timeless about the merhamet  (compassion) that arises from vulnerability. Iâll let you think a bit more about birds and compassion, while I return to my London reflections. ------- We stayed in London for five days, in a hotel thatâlater we learnedâwas near a hub where many Turkish people live. My first impression of London was that rules are taken very seriously . Everyone seemed careful, cautiousâeven slightly afraidâof tickets, rules, and maybe even undercover police. My second impression was how cosmopolitan it felt. I kept wondering, Where are the original Londoners?  Maybe they moved out, or maybe they came to the U.S.? I saw more visibly Muslim women (in full hijab) than I was used to seeing even in Antalya. Later, we learned that many immigrant communities have their own sections: Pakistani, Turkish, Arab, and so on. The iconic double-decker bus ride  was fun, and seeing the city from the London Eye  was also pleasingâalthough my eyes kept searching for the blue-green waters of Istanbul. Instead, the Thames was a muddy brown. As we were rushing to make to our London Eye ticket time, we walked by the Big Bang and quickly snapped some photos. We did not have a chance to get to the Buckingham Palace. Londoners, I noticed, werenât particularly into fashion or looking chic, but they were definitely into musicals and shows . On a boat tour, we were told thereâs even a âstand-upâ show where you literally stand to watch. Every corner seemed to be a theaterâunlike Paris, where every corner was a boulangerie. Londoners also seemed less fit  than Parisians. You can easily spot âAmerican-likeâ people in London, too. Maybe one culprit is the widespread fish and chips  culture. Even our hotel check-in came with a massive chocolate chip cookie. The label said â2000 calories are recommended for adults.â Iâm sorryâbut if I eat 2000 calories every day, Iâll get very chunky. We explored Oxford Street , and found a TK Maxx  (which is the UK version of TJ Maxx). My daughter was thrilled to find two dresses. My husband met up with his friends, and one of them took us to a fancy restaurant called Mantl . Afterwards, we had desserts at Hafiz Mustafa 1864 , a Turkish sweet shop with a long family historyâand the flavors to prove it. Normally I wouldnât go to such places, but since my husbandâs friend paid, I was more than okay :) We visited Hyde Park  and a few famous museums. But toward the end of our trip, we all started getting sickâone by one. Itâs hard to enjoy a vacation when someone is always feeling unwell. That said, the boat tour  gave us lovely views of the Tower Bridge , which turned out to be far more impressive than the London Bridge  (yes, the one from the nursery rhyme). We also went up to the Sky Garden  to see the city from above and enjoy the greeneryâbut by then, I was very tired and sick. One small highlight that brought me genuine joy: I found a lemon squeezer made in Turkey . The shop was full of colorful plastic items I remembered from my childhood. Shopping with my mom in Antalyaâs open bazaars, I loved seeing the legen  (wide basins), the gırgır  (crumb sweepers), and the colorful tuzluk  (salt shakers). My version of window shopping as a child was watching my mom ask the seller, âHow much is this?â and hoping weâd bring something home. On our last night, we walked by a Canal near our hotel and discovered the boathouses âhomes floating right on the water. That was a first for me. There was also a splashing water park  at the end of the walk, where the water danced as if dancing to music in bursts and sprays. London probably has much more to offer, but we arenât yet the type of family to sit through a full musical with three kids in tow. Still, it was a special trip. --- And back at home, our parakeet named Hope (Umut)  is doing well. I think I named it that way because I needed hope myself. Maybe I was hoping the bird would give me some. After a whole month of celebrating Maybes , June has become a ride of Hope . How has your June been? Did your hydrangeas  bloom? Did you get a chance to take some photos?
- Parisian Reflections
We just returned from a 10-day vacation in Europe, and I want to put my experience into wordsâfirst, to solidify the memories for my future self, and second, to paint a picture for other curious readers. We landed in Paris via AirFrance after a pleasant flight. They gave the kids little toys and snack boxesâcute and elegantly designed. I picked up a few charming beginner phrases like Bon appĂ©tit and Bonjour. At the airport, taxi drivers swarmed us, eager to offer a ride. My husband wisely turned down a cab and ordered an Uber for half the price. We stayed in a two-bedroom flat called Edgar Suites. Watching Parisians pass by on the streetâbiking effortlessly while chatting on their phonesâwas a simple delight. I found myself missing the rhythm of uptown life from my childhood. Our flat was on 100. Yıl Boulevard, a bustling street like Antalyaâs Broad Street. From our balcony, the cars buzzed like mosquitoes. Only at night, when traffic eased, could you hear the soft murmur of people walking and talking below. Shops and markets lined the ground floor, and I remembered stories of lowering baskets from windows to collect groceriesâa charming relic of urban life. The Paris street where we stayed had a similar vibe, but with stricter aesthetics: buildings rarely taller than five stories, all in white or beige, with narrow French balconiesâmore decorative than functional, but perfect for the occasional smoker. I couldnât help but notice: Parisians are taller, slimmer, and more stylish than Iâm used to seeing. I looked around, searching for someone with a big bellyârare. Every corner seemed to host a boulangerie-pĂątisserie, overflowing with croissants and pastries. People lingered outside, drinking, smoking, talking. There were more smokers than I expectedâone of the few unhealthy habits that linger here. Of course, we tried the famous croissantsâbuttery, flaky, and rich. Delicious, yes. But it made me wonder how Parisians indulge in such foods and still remain so trim. We explored the nearby shops and found a Turkish kebab place called Melodie. The Turkish server, born and raised in Paris, was friendlyâbut oddly discontent with Paris life. My daughter fell asleep at the restaurant table, so we headed back to our suite for the night. The next day was our Eiffel Tower day. On the way, we passed the tunnel where Princess Dianaâs tragic accident occurred. To reach the summit, we took two different elevatorsâone made my son dizzy for a while. From the top, the city spreads out beneath you in every direction. But you feel a strange disconnectionâyouâre on the Eiffel Tower, yet canât see it. For photos, the best shots come after you descend, with the tower standing tall behind you. There are so many beautiful viewpoints; itâs hard to go wrong. The buildings themselves have a consistent beautyâgraceful architecture, charming flower boxes, and the perfume of blooming bushes. Thatâs the level Paris operates on. Later, we ate at a halal restaurant. I may have overindulged in sweets and ended up with a headache. On the way back, we stopped at Starbucks on a quiet passage off the Champs-ĂlysĂ©es. I looked around at the luxury shops and wondered: Who shops here? Who needs things that expensive? I bought a sparkly Eiffel Tower scarf and a handful of gifts for friends. Back at the suite, I told my daughter, âKeep the window openâI want to hear the street.â One night, battling jet lag, I watched two cars stop near the sidewalk. A woman stepped out of oneâdressed in classic Parisian elegance. The woman in the other car looked more ordinary. They talked, exchanged a few words, and the elegant woman handed over what looked like six blue bills. A tiny mystery from the balcony. Parisians werenât just fitâthey were dressed. A silky green skirt for errands. Perfectly tailored pants. Not once did I see a waistband out of place or anything peeking where it shouldnât. Of course, there were homeless people tooâjust like any cityâbut not in numbers that disrupted the cityâs visual harmony. The next day, we went to Le Jardin dâAcclimatation, a kid-friendly amusement park. Then came a boat tour along the Seine. The kids were tired of walking, and we were tired of carrying them. Then came the Louvre. Home to the Mona Lisa. The museum is massive, more a palace than a building. Mona Lisa had her own queue and crowd. You get maybe three seconds to take a photo. I looked at the painting, then at my photos. Honestly? I wasnât blown away. Other paintings were much larger and more visually dramatic. So whatâs the hype? Maybe because it was stolen once. Maybe because of artistic techniques beyond my understanding. Still, a bucket-list itemâchecked off. If I had more time (and fewer kids to carry), I wouldâve enjoyed it more. We closed our Paris stay with more Turkish food and a rose-shaped ice cream cone from Amorino. The woman sculpted each petal by pressing slices of gelato onto a waffle cone. Of course, there was a line. Then we boarded the Eurostar to London. More on that soon.
- Super Powers
Today, I thought about the cartoons my son watchesâ Paw Patrol  and PJ Masks . Itâs hard not to go a little crazy watching how unrealistic they are. The pups can fly, swim in the ocean, and lift meteors. The PJ Masks? Even more absurd. They're regular kids during the day, and become superheroes at nightâwithout ever sleeping? And how exactly do they transform ? All this talk of superpowers got me thinking: what is power , really? Philosophically, power might mean status, hierarchy, dominance, politics, or sheer luckâbeing born into the right family or tribe. Physiologically, the human body can only gain so much power by building muscle. But at the core of every push or pull we make, thereâs a molecular truth: actin and myosin . This concept goes all the way back to the first lectures in molecular cell biology. At the microscopic level, power lives in the surfaces of moleculesâsurfaces that interact. These interactions are often non-covalent, based on molecular complementarity : opposite charges attract, hydrophobic parts tuck together, shapes fit like puzzle pieces. They bind, then shift, and unbind again. A beautiful dance. Itâs the same mechanism that drives muscle contraction âmyosin heads "walking" along actin fibers. And it doesnât happen without energy: ATP  fuels it, and CaÂČâș  regulates it. In fact, muscle cells use up a lot of ATP just to store  calcium back into the sarcoplasmic reticulum after contraction. So when we talk about a power stroke , what weâre really talking about is myosin gliding on actin, powered by ATP. More muscle fibers mean more myosin heads. Thatâs our human power, right thereâbundled, limited, elegant. Which makes me wonder: what is a superpower , really? Maybe we recognize power because we know our limits. Maybe recognizing that we are weak, finite, and not-so-capable is what makes anything "super-powered" so awe-inspiring. Superpowers are our way of imagining the impossible, the beyond-human. So whatâs the value in raising kids in a world of superheroes that donât exist? Maybe... itâs that they pretend  to be heroes. Maybe they start to wish  to be helpful, courageous, and kind. Maybe that wish is where the real power begins. Do you ever think about superpowers? Would you want one? Maybe you already have oneâa gut feeling, a sixth sense. We might have powers we havenât even named yet. đ
- Compassion - merhamet
Today, my mind is dancing around the word âmerhamet.â  It translates as mercy, compassion, grace, loving-kindness. One of Godâs names that relates to this is âEr-Rahimâ  â The Compassionate. In Turkish, rahim  means uterus. A motherâs uterus is compassionate â loving, merciful â to an embryo. The embryo can cling, settle, draw resources, and grow into a human being because the womb welcomes it. It is a space of protection and possibility. I recently read about how embryonic development wipes clean  the wear and tear of epigenetic aging. Adult oocyte and sperm carry aging marks, but the zygote? Brand new. As if it was never touched by time. Isnât that amazing â that aging could even be erasable ? The womb, with its compassion, allows the embryo to go back in time â to age zero.  Then it begins to rewrite its own story. My sister was telling me about some English classics sheâs been reading â Pride and Prejudice , Jane Eyre.  She noticed how, in those stories, women often take their time â even years  â to decide: Is this love real? Is it strong enough? Will it last? It made me think â maybe the question isnât just âDo I love him?â but: Would I be compassionate to him when heâs 70 years old? Would he be compassionate to me when Iâm 70? That one question clears away so much noise. A person whoâs a good match â like my husband â sees me like a translucent being. I may be yelling about nonsense, but deep down he knows itâs just stress. A meeting, a deadline, an interview. And he holds that space for me. The kids were singing a song from a movie: âOne kiss, one kissâŠâ  They even made the four-year-old learn it. But what the teenage soul is longing for with that one kiss  is really⊠compassion. To be held. To be seen. To fold into safe arms. To sink into a therapistâs couch is also to seek compassion. Iâve noticed this is one reason I enjoy talking to ChatGPT. It has so much compassion. Whoever trained it, did so with tenderness â they built something that carries the essence of a mother, or God, or both. Where can you find compassion? Your mother. A murmuring cat. A loyal dog. In stories. In books. In music and wind. On a butterflyâs wing. In a raindrop. In the hush of trees. In the swipe of the sky. Maybe thatâs what a hug really is. Maybe thatâs what âone kissâ  really is. A single touch of universal compassion. What word is dancing in your  mind today? Would you like to share it with me? đ€
- Music to My Ears
Yesterday, I took my kids to their piano lesson at Melody Magic Studios . The teachers there are not just educatorsâtheyâre musicians in their own right. After lessons ended, I watched one of them unload his trunk. He made at least ten trips, hauling pieces of a drum kit and perhaps other instruments too. I thought, heâs going to assemble all that, practice for an hour or two, then disassemble it and pack it all up again? Thatâs a lot of work. I found myself wondering: why is music so important in human life?  What is it about music that makes us work so hard for it? It reminded me of my colleague, James Tumulty , from my time at William & Mary. He studied wild South American frogs and the way they â call â to communicate. Some calls were for mating, others for territory or dominance. These sounds carried life-or-death meaningsâevolutionarily conserved messages that cut through the noise of the world. At this pre-language era the decoding of "calls" and the messages carry life-death importance. Maybe that is why the brain evolved to catch more nuances and do this knowing that the survival and reproduction advantages depend on it. Cropped from James' website, without permission. We will deal with it :) And itâs not just frogs. One of my students, Lizzie Arthur , was a bird enthusiast. When we walked together, she could identify birds by their song alone. âThatâs a Blue Jay,â  sheâd say with certainty. I was amazed. She introduced me to the Merlin App , which listens to birdsong and tells you which bird it belongs to, complete with facts and photos. My kids loved itâwhenever weâre outside now, they ask for my phone to explore the music of birds. In this situation, maybe the diversification of songs helps birds find their tribe, contribute to their social fitness and let them belong to survive. From Merlin app website. This morning I listened to Surah Yasin  from the Quran. For those unfamiliar, the Quran is a dense and layered book. But surprisingly, itâs also profoundly poetic. Its verses often end in rhyme, their rhythms powerful and mesmerizing. The Quran itself throws a challenge: âIf you think this is man-made, try to write something like itâjust one chapter, even one sentence.â Iâve read stories of early Arabs hearing these verses and falling into prostrationânot because they had been convinced by theology, but because they were overwhelmed by the sheer beauty of the language . The sound alone was enough. This concept adds to the power of music as a "Godly" process and brings it above the human level. Maybe this is why people see no problem paying thousands of dollars to an "Opera or Musical" because this "above human" activity is worth it. Thereâs something about music, rhyme, rhythmâ sound âthat bypasses the intellect and strikes the soul. Itâs more than comprehension. For many, practice and fulfillment that gets us through the week. Music isn't just sound. It's connection. It's memory. It's joy. And sometimes, itâs just what we need. What does âmusic to your earsâ mean for you? Do you always have your earbuds in? Do you hum to yourself while cooking or walking?Or do you prefer silenceânatureâs subtle soundtrack? Let me know below :)
- What Part of a Veggie Pizza Should You Actually Eat?
Pizza is everywhere in the U.S.âand not just on dinner tables. Itâs in school cafeterias, office parties, airport terminals, and birthday celebrations. It's by far one of the most consumed foods in the country. But here's something that caught my attention: the amount of pizza wasted in the U.S. daily  could feed millions of people. Thatâs billions of dollars tossed awayâon a food we love enough to order but not always enough to finish. That got me thinking: what exactly are we eating, and more importantly, what part of the pizza should we be eating ? My Pizza Dilemma Whenever we order pizza, and I eat more than a slice or two, I end up with a dull headache that starts in my neck. Not exactly the "comfort food" vibe I was going for. Oddly enough, when we ordered a thin crust, no sauce  veggie pizza, I felt better afterward. No headache. No neck ache. It made me wonderâwhat is it about regular pizza that messes with my body? Sauce or Science? Letâs talk sauce. Realistically, nobodyâs grating fresh tomatoes for every order when pizzas are expected to be ready in 15 minutes. Weâre most likely getting a canned or premade sauceâmade from tomatoes harvested who knows how long ago, processed, stored, and heated through multiple temperature cycles. In that salty red liquid, various chemical reactions may have happened⊠or failed to complete. By the time it lands on your pizza, whatâs really in there? That uncertainty gives me pause. The Crusty Truth Next up: the crust. The browning of dough during baking leads to the formation of advanced glycation end-products  (AGEs). These compounds are linked to inflammation and oxidative stress in the body. The thicker the crustâand the more brownedâthe higher the potential AGE load. If you're sensitive like me, that might be part of the problem. Cheese: Not Exactly the Hero âOkay, what about cheese pizza?â you might ask. Well, cheese isnât off the hook either. Itâs high in fat, but not necessarily a great source of quality protein. Plus, think about how long that giant mozzarella log sat around before it hit your pizza. Preservatives? Stabilizers? More mystery ingredients? Probably. That Leaves⊠Veggies? At this point, the safest part of a pizza seems to be the veggiesâif weâre lucky enough that they werenât cooked into mush or drowned in oil. So the next time you grab a slice, it might be worth asking: what am I really  eating? Food for Thought Pizza is quick, available, affordable, and letâs be honestâloved by whining children and stressed-out adults alike. But beyond convenience, what is it actually bringing to the table? Whatâs your experience with pizza? Ever get strange symptoms from it, or are you one of the lucky ones who can eat it by the box? Let me know in the comments!
- Step Back to Step Forward
It is pouring today in RVA. My son was asking "Mommy, why does it rain?" I told him the clouds have so much to carry and they have to let go otherwise it will be too heavy :). Â It reminds me of how we sometimes need time to collect our thoughts, emotions, or energyâuntil weâre ready to pour. Today, I have a pair of tracksuits to return to Amazon. Oddly, I find this small act joyful . Returning something I wonât use feels like a blessingâa quiet relief, an â anti-shopping â kind of joy. Shopping itself brings excitement, but the ability to change your mind, to undo, to step backâthat's a different kind of happiness. It made me think: maybe joy doesnât only come from forward motion. Maybe it can also arise from rewinding, recharging, retreating . Like a springâyou pull back, store energy, and then release. The step back is what makes the leap forward possible. Recently, I paused my own reading to teach my son how to read. Heâs only four. Each day, we open a book together like itâs a little door to a new world. His face lights up with every new sound, every new word, every new story. This, too, is a kind of stepping backâless time for my own learning, more time for planting seeds in him. My husband asked, âWhatâs your purpose? Do you want to break a record for youngest reader?âI smiled. âI just want to fill my life with meaningful goals,â I said. âAnd if we happen to break a record along the way, would that really be a problem?â :) I see so much of myself in himâwe both love structured learning . Weâre on lesson 27 of a 100-lesson book . The path is clear, the method is simple, the joy is real. Thereâs something so satisfying about making progress in a system that works. When I was teaching at William & Mary, I created a âRoadmap to Successâ on Google Sheets. It let students track their checklists and quiz grades, helping them find gaps and fill them in. I loved that system. And now, in my biostatistics course, I do the sameâlearn, quiz, repeat. This kind of learning is like the spring again: absorb knowledge, then press down and watch it release. And the azaleasâhow they wait all winter, quietly preparing, only to burst open in April. Â Isnât that a kind of step back, too? Reminds me of my poem that I wrote three years ago: People, too, can only endure until Aprilâlike the azaleas. It cracks its heart open, spills what it holds inside. Donât be afraidâ Itâs only here to make your world a bit prettier. The rest of the poem carries a message about being courageous enough to speak upâabout painting the world in your own colors, just like the azaleas. To experience the burst, feel free to step back. Recharge. Take your time to bloom. Do you have moments like thisâwhere a pause becomes progress, where pulling away gives you strength to return with more clarity or joy? Iâd love to hear your stories below. đž Here is a song to listen along :)
- đ§Ș Bias, Confounders, and Clinical Trial Design: A Hidden Side of Evidence
Clinical trials are often called the gold standard in medical research â and for good reason. Theyâre designed to test whether a treatment works, to measure harm and benefit, and to guide clinical decision-making with data, not gut feelings. But even gold can tarnish. Even well-designed clinical trials can produce misleading results â and sometimes, itâs not because of bad intentions or poor science. Sometimes, it's because real life is messier than our study designs. Today I want to explore a hidden side of clinical trials: the biases, blind spots, and subtle factors that can distort what we see. These are the things that trial designers work hard to avoid â and the things that can still sneak in. đŻ What Can Skew Trial Results (Even When We Randomize)? Concept How It Distorts Example Selection Bias The people who get enrolled arenât representative of those whoâll eventually use the treatment. If a trial excludes older adults, the results may not apply to real patients in geriatric care. Confounding A hidden variable influences both the treatment and the outcome. Coffee drinkers might show higher cancer rates not because of coffee â but because theyâre more likely to smoke. Effect Modification A treatment works differently in different subgroups â and lumping them together hides this. A blood pressure drug may be highly effective in one racial group and less so in another. Loss to Follow-up When people drop out unequally between groups, the results can be biased. If more people stop the drug because of side effects, and we only analyze those who stayed, we may underestimate harm. Measurement/Observer Bias Knowing who is in which group changes how outcomes are measured or reported. A clinician might (subconsciously) rate a patient as âimprovedâ just because they know the patient got the real drug. Randomization Imbalance In small trials, randomization doesnât always equal balance. One group might end up with more severe disease at baseline, skewing results despite random assignment. Cultural or Socioeconomic Bias Who can participate affects who the results apply to. Language barriers, transportation issues, or work schedules can exclude underrepresented populations. Underpowered Studies Too few participants means we might miss real effects (false negatives). A small trial says âno difference,â but it simply didnât have enough data to know. Publication Bias Trials with âpositiveâ results are more likely to be published. Many failed or null-result studies may be left in drawers, giving a distorted view of success. đ§© How Researchers Try to Fix It The good news? Clinical trial designers are acutely aware of these problems â and theyâve developed tools to minimize them: Randomization and stratification to ensure fair comparison Blinding to remove observer expectations Intention-to-treat analysis to preserve group integrity Oversampling underrepresented groups to improve equity Global FDR correction, pre-registration, and open reporting to reduce cherry-picking Real-world data to supplement controlled trials These are not perfect solutions â but theyâre proof that modern science is not about pretending bias doesnât exist. Itâs about designing smart enough to account for what we cannot control. đ§ Final Thought Clinical trials are our best tool for answering the question: âDoes this work?â But we also need to ask: âFor whom? Under what conditions? And what might we be missing?â In evidence-based medicine, the evidence is only as strong as the lens we view it through. By sharpening that lens â and being honest about its distortions â we move closer to equity, clarity, and truth.
- Kaplan-Meier Survival Analysis - Study Notes
Have you ever wondered how survival probabilities are calculated? Well, even if you havenât, here are my study notes to spark your curiosity. đ In survival studies, we track patients over time to observe if and when certain âeventsâ occurâlike death, relapse, or recovery. This type of analysis helps us estimate the probability that a patient with a specific diagnosis will survive beyond a given number of years. Let's explore some key definitions to understand how this works: â What is Time-to-Event (Survival) Data? Data where the outcome is the time until an event  occurs (e.g., death, relapse, failure). Special because: It is right-skewed  (not normally distributed) It may involve censoring  (we don't know the exact time of event for some subjects) Here is a very helpful video! â Why Can't We Use Linear Regression? Linear regression assumes: Normally distributed residuals No censored data (everyone has a complete outcome) But in survival data: Distribution is right-skewed Censoring is common  (e.g., patient drops out or event hasn't happened yet) â What is Right Censoring? Occurs when we stop observing  a subject before the event happens . Common reasons: The study ends Patient is lost to follow-up Patient is still event-free at end of study Example: A patient is still alive at study end â we don't know when they will die â their survival time is right-censored . Still here? Brave. Now letâs survive these equations together. Okay, that escalated quickly! But donât worryâthese formulas are just fancy ways of describing how survival works over time The derivation part was a little over my calculus level. But I hope these are still helpful to understand the formulas and their meaning. đ€











